From things I've picked up in the past via Symantec, there's 2 different
versions that affect an mbr oriented virus. One can be fixed via a repair
of the mbr by using fdisk/mbr (FAT32) with the proper version of msdos, and
in the case of NTFS type 3 fixmbr from the recovery console. Disk overlays
for total use of the hard disk can be wiped as result. The other type can
only be fixed by entirely wiping the first sector of the hard drive. They
are both redirects of the bootstrap. Some 3rd party boot managers use this
method to implement their boot menu.
The partition boot record exists on the first bootable partition of a hard
disk on a PC. Some types of infections may exist here. This where the mbr
directs the system to boot the operating system. Though an entirely
different animal, many people get these confused with mbr resident viruses.
http://en.wikipedia.org/wiki/Volume_Boot_Record
http://en.wikipedia.org/wiki/Master_boot_record
http://en.wikipedia.org/wiki/Boot_sector
If you read both carefully, you can see that both the mbr and the active
primary partition participate before the operating system actually commences
loading from the hard disk.
How to fix your system specifically depends on the infection type and actual
location on the hard disk's sector zero. A zero write, implemented from
write protected boot media, will wipe either type. This type of software,
provided by hard disk manufacturers, will also map out bad areas of the hard
drive, and passed along to the partitioning program so it won't attempt to
use such bad areas. Subsequent use of Scandisk or other such programs will
never see such areas as they don't exist within the partition's designated
area.